[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 110 items for (author: schmitz & ka)

EMDB-28907:
Gi bound mu-opioid receptor in complex with beta-endorphin
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

EMDB-28908:
Gi bound mu-opioid receptor in complex with endomorphin
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

EMDB-28909:
Gi bound delta-opioid receptor in complex with deltorphin
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

EMDB-28911:
Gi bound kappa-opioid receptor in complex with dynorphin
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

EMDB-28912:
Gi bound nociceptin receptor in complex with nociceptin peptide
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

PDB-8f7q:
Gi bound mu-opioid receptor in complex with beta-endorphin
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

PDB-8f7r:
Gi bound mu-opioid receptor in complex with endomorphin
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

PDB-8f7s:
Gi bound delta-opioid receptor in complex with deltorphin
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

PDB-8f7w:
Gi bound kappa-opioid receptor in complex with dynorphin
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

PDB-8f7x:
Gi bound nociceptin receptor in complex with nociceptin peptide
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

EMDB-25667:
IP3 and ATP bound type 3 IP3 receptor in the pre-active A state
Method: single particle / : Schmitz EA, Takahashi H, Karakas E

EMDB-25668:
IP3 and ATP bound type 3 IP3 receptor in the pre-active B state
Method: single particle / : Schmitz EA, Takahashi H, Karakas E

EMDB-25669:
IP3 and ATP bound type 3 IP3 receptor in the pre-active C state
Method: single particle / : Schmitz EA, Takahashi H, Karakas E

EMDB-25670:
IP3, ATP, and Ca2+ bound type 3 IP3 receptor in the active state
Method: single particle / : Schmitz EA, Takahashi H, Karakas E

EMDB-25671:
IP3, ATP, and Ca2+ bound type 3 IP3 receptor in the inactive state
Method: single particle / : Schmitz EA, Takahashi H, Karakas E

PDB-7t3p:
IP3 and ATP bound type 3 IP3 receptor in the pre-active A state
Method: single particle / : Schmitz EA, Takahashi H, Karakas E

PDB-7t3q:
IP3 and ATP bound type 3 IP3 receptor in the pre-active B state
Method: single particle / : Schmitz EA, Takahashi H, Karakas E

PDB-7t3r:
IP3 and ATP bound type 3 IP3 receptor in the pre-active C state
Method: single particle / : Schmitz EA, Takahashi H, Karakas E

PDB-7t3t:
IP3, ATP, and Ca2+ bound type 3 IP3 receptor in the active state
Method: single particle / : Schmitz EA, Takahashi H, Karakas E

PDB-7t3u:
IP3, ATP, and Ca2+ bound type 3 IP3 receptor in the inactive state
Method: single particle / : Schmitz EA, Takahashi H, Karakas E

EMDB-13102:
human LonP1, R-state, incubated in AMPPCP
Method: single particle / : Abrahams JP, Mohammed I, Schmitz KA, Schenck N, Maier T

PDB-7oxo:
human LonP1, R-state, incubated in AMPPCP
Method: single particle / : Abrahams JP, Mohammed I, Schmitz KA, Schenck N, Maier T

EMDB-13135:
SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with A
Method: single particle / : Kabinger F, Stiller C, Schmitzova J, Dienemann C, Kokic G, Hillen HS, Hoebartner C, Cramer P

EMDB-13138:
SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with G
Method: single particle / : Kabinger F, Stiller C, Schmitzova J, Dienemann C, Kokic G, Hillen HS, Hoebartner C, Cramer P

PDB-7ozu:
SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with A
Method: single particle / : Kabinger F, Stiller C, Schmitzova J, Dienemann C, Kokic G, Hillen HS, Hoebartner C, Cramer P

PDB-7ozv:
SARS-CoV-2 RdRp with Molnupiravir/ NHC in the template strand base-paired with G
Method: single particle / : Kabinger F, Stiller C, Schmitzova J, Dienemann C, Kokic G, Hillen HS, Hoebartner C, Cramer P

EMDB-12313:
P2c-state of wild type human mitochondrial LONP1 protease with bound endogenous substrate protein and in presence of ATP/ADP mix
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

EMDB-12315:
R-state of wild type human mitochondrial LONP1 protease bound to endogenous ADP
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

EMDB-12316:
D1-state of wild type human mitochondrial LONP1 protease
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

EMDB-12317:
Human mitochondrial Lon protease homolog, D2-state
Method: single particle / : Mohammed I, Abrahams JP, Schmitz KA, Maier T, Schenck N

PDB-7ngf:
P2c-state of wild type human mitochondrial LONP1 protease with bound endogenous substrate protein and in presence of ATP/ADP mix
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

PDB-7ngl:
R-state of wild type human mitochondrial LONP1 protease bound to endogenous ADP
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

PDB-7ngp:
D1-state of wild type human mitochondrial LONP1 protease
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

PDB-7ngq:
Human mitochondrial Lon protease homolog, D2-state
Method: single particle / : Mohammed I, Abrahams JP, Schmitz KA, Maier T, Schenck N

EMDB-12312:
P2a-state of wild type human mitochondrial LONP1 protease with bound substrate protein and in presence of ATPgS
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

PDB-7ngc:
P2a-state of wild type human mitochondrial LONP1 protease with bound substrate protein and in presence of ATPgS
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

EMDB-12306:
P1a-state of wild type human mitochondrial LONP1 protease with bound substrate protein and ATPgS
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

EMDB-12307:
P1b-state of wild type human mitochondrial LONP1 protease with bound endogenous substrate protein and in presence of ATP/ADP mix
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

EMDB-12308:
P1c-state of wild type human mitochondrial LONP1 protease with bound substrate protein in presence of ATP/ADP mix
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

PDB-7nfy:
P1a-state of wild type human mitochondrial LONP1 protease with bound substrate protein and ATPgS
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

PDB-7ng4:
P1b-state of wild type human mitochondrial LONP1 protease with bound endogenous substrate protein and in presence of ATP/ADP mix
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

PDB-7ng5:
P1c-state of wild type human mitochondrial LONP1 protease with bound substrate protein in presence of ATP/ADP mix
Method: single particle / : Mohammed I, Schmitz KA, Schenck N, Maier T, Abrahams JP

EMDB-21714:
Polyclonal immune complex of Fab binding the side of the head of H1 HA from serum of participant 11 at day 0
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21715:
Polyclonal immune complex of Fab binding the receptor binding site of H1 HA from serum of participant 11 at day 0
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21717:
Polyclonal immune complex of Fab binding the stem of H1 HA from serum of participant 11 at day 0
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21719:
Polyclonal immune complex of Fab binding the side of the head of H1 HA from serum of participant 11 at day 6
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21722:
Polyclonal immune complex of Fab binding the stem of H1 HA from serum of participant 11 at day 18
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21723:
Polyclonal immune complex of Fab binding the side of the head of H1 HA from serum of participant 11 at day 18
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21726:
Polyclonal immune complex of Fab binding the receptor binding region of H1 HA from serum of participant 11 at day 18
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

EMDB-21729:
Polyclonal immune complex of Fab binding the receptor binding region of H1 HA from serum of participant 11 at day 35
Method: single particle / : Han J, Ward A, Richey ST, Yang YR

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more